ImageJ Macors

ImageJ Macors

Counting paramecia in Fiji/ImageJ with pieces of macros

ImageJ Macro writing takes some time. When the number of the files to be processed is not extremely large, doing it manu...
Batch processing

How to read Hamamatsu Photonics CXD files in ImageJ and save them as TIFF files automatically

I am using Hamamatsu Photonics ORCA Flash 4.0 with the accompanied image acquisition software, HCImage. After time-lapse...
ImageJ Macors

Prey capture assay for zebrafish larvae ~ Counting the number of the paramecia

To quantitatively describe the ability of prey capture in zebrafish larvae, I need to count the number of paramecia cons...
Batch processing

Batch processing of behavioral data ~ How to anlyze locations of individual animals

In behavioral studies, we want to analyze the locomotion. If we work on a single individual, we can easily obtain the po...
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